Analysis Repository
ImarisXT
Matlab
Python
FIJI
R
Over the last few years, we have written a variety of custom analysis code for our users. The distinct scripts have been organized below. Please follow the links to a more complete description and installation instructions.

Contact Adam Fries (adam.fries@ucsf.ed) or the BIDC (bidc@ucsf.edu) for additional description or help.



The full respository can also be found on GitHub.

THIS PAGE IS A WORK IN PROGRESS
Object Analysis

Object Tracking

Segmentation

Spatial Distribution

Post-Processing
Instrument Control
Quality of Life