Image Analysis Guides
Software:
  • Getting Started with FIJI (pdf)
  • Getting Started with Imaris (pdf)
  • Getting Started with Elements (pdf)
  • Matlab Extensions with Imaris (pdf)


Analysis Techniques:
  • Preprocessing; background subtraction, thresholding, filtering (pdf)
  • Separating objects through Watershed (pdf)

Past Workshops:
  • Making Macros in FIJI (pdf)